../../tmp/servers/virsirnadb/966149452
Result for your query siRNA sequence
| RED | =100 % Complementary sequence |
| . | =Identical residue |
| blue alphabets | =mismatch |
| _ | =Gap |
| Acc number | Strain name | Start | Alignment | End | % Identity |
| Query | virsi1429 | 1 | aagacacaaccacttgcgga | 20 | |
| U12396.1 | LCU12396 La Crosse virus RNA-dependent RNA polymerase mRNA, complete c | 2497 | .................... | 2516 | 100 |
| AF525489.1 | La Crosse virus RNA-dependent RNA polymerase (L) mRNA, complete cds | 2436 | .................... | 2455 | 100 |
| DQ196118.1 | La Crosse virus strain 77 segment large, complete sequence | 2497 | .................... | 2516 | 100 |
| DQ196118.1 | La Crosse virus strain 77 segment large, complete sequence | 1637 | _.........aca..ta... | 1655 | 70 |
| EF485032.1 | La Crosse virus strain LACV/human/1960 segment large, complete sequen | 2497 | .................... | 2516 | 100 |
| EF485035.1 | La Crosse virus strain LACV/human/1978 segment large, complete sequen | 2497 | .................... | 2516 | 100 |
| EF485038.1 | La Crosse virus strain LACV/mosquito/1978 segment large, complete seq | 2497 | .................... | 2516 | 100 |
| EF485038.1 | La Crosse virus strain LACV/mosquito/1978 segment large, complete seq | 1637 | _.........aca..ta... | 1655 | 70 |
| AF123489.1 | Keystone virus polyprotein mRNA, complete cds | 3312 | ............________ | 3301 | 60 |
| EU616903.1 | Chatanga virus strain LEIV-17756 segment L, complete sequence | 2446 | _..g.........c.t..c. | 2464 | 75 |
| EU616903.1 | Chatanga virus strain LEIV-17756 segment L, complete sequence | 5156 | ___.t.........______ | 5166 | 50 |
| U88058.1 | JCU88058 Jamestown Canyon virus M segment polyprotein gene, complete c | 3306 | ..t.........________ | 3295 | 55 |
| AF123487.1 | Jerry Slough virus polyprotein mRNA, complete cds | 3306 | ..t.........________ | 3295 | 55 |
| EU789573.1 | Inkoo virus segment large strain KN3641, complete sequence | 1144 | .........g..________ | 1155 | 55 |
| EU789573.1 | Inkoo virus segment large strain KN3641, complete sequence | 644 | ___________......... | 636 | 45 |
| EU789573.1 | Inkoo virus segment large strain KN3641, complete sequence | 1618 | _.........__________ | 1626 | 45 |
| K02539.1 | SSHM Snowshoe hare virus, complete M RNA segment coding for G protein | 3918 | ___.........t.______ | 3928 | 50 |
| K02539.1 | SSHM Snowshoe hare virus, complete M RNA segment coding for G protein | 2702 | .........___________ | 2710 | 45 |
| U88057.1 | MVU88057 Melao virus M segment polyprotein gene, complete cds | 276 | ______.........t.___ | 266 | 50 |
| EU262553.1 | Snowshoe hare virus segment M G1/G2 membrane polyprotein gene, comple | 3899 | ___.........t.______ | 3909 | 50 |
| EU262553.1 | Snowshoe hare virus segment M G1/G2 membrane polyprotein gene, comple | 2683 | .........___________ | 2691 | 45 |
| U88059.1 | IVU88059 Inkoo virus isolate KN3641 M segment polyprotein gene, comple | 926 | __........._________ | 918 | 45 |
| AF229129.1 | Tahyna virus middle segment RNA ORF (M-RNA) mRNA, complete cds | 929 | __........._________ | 921 | 45 |